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Sample management software that keeps every sample in context

Sample Manager is cloud-based sample management software built to help labs track every sample with confidence. From receipt and aliquoting to storage, retrieval, shipping, and chain of custody, it provides end-to-end visibility across the sample lifecycle. Configurable workflows, freezer management, and rich sample context help labs reduce manual effort, improve accuracy, and stay ready for audits. Sample Manager also supports laboratories seeking to align with requirements such as 21 CFR Part 11 and HIPAA.

  • Configure sample types, metadata, and workflows to fit the way your lab works
  • Maintain end-to-end sample traceability across collection, processing, storage, and shipping
  • Centralize sample inventory, freezer management, and records in one easy-to-use platform
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Trusted by research teams and lab operations leaders worldwide.

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Why labs choose Sample Manager

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Centralized Tracking for the Full Sample Lifecycle

Disconnected tools make it difficult to maintain visibility across the sample lifecycle. Sample Manager brings receipt, processing, storage, retrieval, and shipment into one centralized system, so labs can track every sample with confidence from intake through final disposition.

Unique Workflows Need Unique Set-Ups

Sample Manager is designed to be configurable around your lab’s SOPs. Adapt sample types, metadata, workflow systems, and storage management to fit your lab – and evolve your system as your lab changes.

Traceability Built-In For Stronger Context

From chain of custody to sample history, Sample Manager creates a digital record of every key sample event. That means better visibility, fewer manual errors, and stronger support for audit readiness and compliance-focused lab operations.

Real Storage Management Makes Retrieval Easy

Sample Manager helps teams organize freezer inventory, track exact storage locations, and quickly find the samples they need. With structured storage management and searchable records, labs spend less time searching and more time moving work forward.

Sample management software built for complete sample visibility

Track Every Sample

Stay connected to every sample from receipt through final disposition - and more.

Sample Manager gives labs one centralized place to track samples across the full lifecycle, including receipt, processing, aliquoting, storage, retrieval, and shipment. With connected records for lineage, chain of custody, metadata, and sample status, teams can maintain visibility, reduce errors, and move work forward with confidence.

  • Track every sample event across the full lifecycle, from intake to storage to shipment
  • Capture lineage, aliquot relationships, and chain of custody in one connected record
  • Configure sample types, metadata, and statuses to match your lab’s processes and study context
  • Maintain clear visibility into where samples are, what changed, and what happens next

Manage Storage with Confidence

Organize freezer inventory and retrieve samples without the guesswork.

Sample Manager helps labs manage freezer storage with clear location tracking, visual organization, and complete storage history. From capacity planning to freeze/thaw tracking, every storage detail stays tied to the sample record so teams can find what they need faster and avoid costly mistakes.

  • Configure freezer layouts and storage structures to reflect how your lab stores samples
  • Track sample movements in and out of storage with detailed location history
  • Capture storage attributes, quantities, and freeze/thaw history as part of the full sample record
  • Visually manage freezer capacity and sample placement without relying on spreadsheets

Standardize Lab Operations

Bring consistency to lab processes with workflows and digital records.

Sample Manager helps labs replace manual handoffs and disconnected tracking with configurable workflows built around their SOPs. Standardized processes, structured data capture, and digital history make it easier to reduce manual effort, improve consistency, and stay prepared for internal reviews or external audits.

  • Configure workflows to match your lab’s SOPs, sample processes, and team responsibilities
  • Reduce manual entry and repetitive tracking with standardized steps and reusable templates
  • Keep digital records of sample activity, process changes, and handoffs in one system

Take a tour of Sample Manager!

Learn more about the features and capabilities of Sample Manager with an interactive tour.

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Sample Manager Pricing

Starter

Perfect for labs wanting to track samples and their freezer storage.

$109/user/month*

Professional

Ideal for labs capturing experimental data and documenting work via ELN and workflow.

$219/user/month*

Freezer Management table check table check
Sample Registration table check table check
Source Registration table check table check
Sample Lineage table check table check
Audit Trail & CFR Part 11 Compliance Support
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Secure Cloud Hosting
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Implementation, Training & Support table check table check
Electronic Lab Notebook table check
Assay Data Management table check
Data Partitioning table check
Workflow Management table check
API Access & Support table check
Backup Retention 90 days 180 days
HIPAA Compliance
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Add-on
Software Validation
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Add-on
*Pricing for a minimum of 5 users, billed annually. Volume discount pricing is available. 

FAQ: LabKey Sample Manager

LabKey Sample Manager is a cloud-based sample tracking and management solution built for life science labs. It gives teams a centralized, searchable system for registering samples, tracking storage, managing workflows, and maintaining full chain-of-custody — without requiring coding or IT support.

Sample Manager is used across a range of life science environments — from academic research labs and biobanks to clinical and translational research teams. It's designed for labs that need to move beyond spreadsheets but want a solution that's fast to implement and easy to configure without developer involvement.

Every sample in LabKey Sample Manager has a full, timestamped history — including who registered it, where it's been stored, how it's been processed, and any changes made along the way. The sample timeline and audit trail give lab managers and QA teams an always-current, digital record that's ready for internal review or external inspection at any time.

Sample Manager supports barcode scanning, template-driven data entry, and batch imports from tabular formats — so your team captures data once, accurately, and without re-keying across systems. Data validation rules help prevent errors at the point of entry.

Yes, we’re always here to help. Sample Manager clients are provided with included training and onboarding assistance, as well as comprehensive online documentation.

The Professional edition of Sample Manager offers APIs (JavaScript, Python, R) to integrate with third-party systems. Additionally, our LabKey Server SDMS (that includes Sample Manager) has built-in integrations with external databases, analytics tools, and more.

Yes, users can create their own (unlimited) fields for each Sample Type, Source Type and Assay Type they create. Custom fields can be used for a variety of uses including tracking shipments and QC status.

Yes, Sample Manager supports compliance with 21 CFR Part 11 regulations. HIPAA-compliant hosting and features are available as an add-on.

LabKey Sample Manager is purpose-built for sample tracking, storage management, and SOP-driven workflows. It's ideal for labs that need robust sample chain-of-custody and lifecycle management in a solution that deploys quickly and scales with your team.

LabKey LIMS builds on that foundation with deeper capabilities for instrument data integration, advanced protocol execution, configurable experiment metadata schemas, and centralized scientific data management across multi-team or multi-study environments. If your lab needs to connect instruments, manage complex data pipelines, or unify research data across projects, LabKey LIMS may be the better fit.

Not sure which is right for your lab? Talk to our team.

Learn more about Sample Manager

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Creating a Laboratory Workflow for Sample Management

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Picking the Right Sample Management System for Your Lab

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