Assay Data Integration with LabKey Server
LabKey Server’s assay data integration capabilities allow teams to model large quantities of instrument data in a meaningful way and prepare it for integration with related demographics, clinical results, and calculated values.
LabKey Server Assay Data Framework
LabKey Server supports the integration of assay data and metadata files from NAb, flow cytometry, proteomics, and other assay types. Use instrument specific assay tools or a general purpose assay type template that supports all common tabular formats (XLS, XLSX, CSV) for custom assay designs. The platform also provides special built-in dashboards and reports to help users make sense of this specialized data.
Both general and instrument-specific assay types are highly-flexible and configurable, so users can extend the reach of any available type to fit their needs.
Flexible General Purpose Assay Designs
Specialized Assay Data Management Tools
Explore LabKey Server’s specialized tools for assay data management below and read additional documentation on the LabKey support and documentation portal.
Import flow cytometry probe/sample values from FlowJo or FCS Express. Apply common gating strategies and view graphs directly.
The plate-based enzyme-linked immunosorbent assay (ELISA) measures antibodies and proteins in samples. Import raw data from BioTek Microplate readers.
Import raw data files from CTL, Zeiss, and AID instruments to analyze antigen-specific responses at the cellular level.
Import raw data files from CTL, Zeiss, and AID instruments. Similar to ELISpot, but the detection mechanism uses fluorophores instead of enzymes.
Import results from High-Performance Liquid Chromatography assays.
Analyze, integrate, quality control, and share Luminex immunoassay data in the multi-sheet BioPlex export file format.
NAb (Neutralizing Antibody) Assays
Import results from high- or low-throughput neutralizing antibody assays measuring the effectiveness of therapeutic treatments.
Import mass spectrometry data files, including MzXML, and protein expression experiments. Both Discovery and Targeted Proteomics are supported.
LabKey supports workflows for microarray data including runs from Agilent MageML files, Affymetrix data from a GeneTitan instrument, and gene expression microarrays from a Gene Expression Omnibus series of probe/sample values.
Support for DNA sequencing and genotyping examples.